Using ATLAS-D2K

Querying the ATLAS-D2K Data Browser Batch Querying Data Boolean Anatomy Search Exporting Data Policy for Accessing Human Sequencing Data

Submitting Data - Before You Begin

Accessing ATLAS-D2K Resources Standard file formats for data submission Curation Workflow Data submission curation state diagram Reviewing Data for Release

Submitting Data

Data Collections Sequencing and Multiomics Specimen and Imaging Antibodies and Antibody Validation Cell Lines Protocols Functional Assays Handbook Single Cell Visualization Files Register Human Adult Data with HRA

Citing Data

Create Citable Datasets Shortcut URLs for Citation and Sharing

Editing and Uploading Tools and Features

Bulk Upload with DERIVA Client Tools Bulk Uploading Images Advanced Editing Features Commandlines and Libraries Tips for Submitting Large or Complex Data

Reference

Educational tutorials FAQs Formatting with Markdown

Shortcut URLs for citation and sharing

The ATLAS-D2K data browser allows you to use “shortcut” URLs for easier (and better-looking) citation and sharing of any ATLAS-D2K record.

To use, make note of the RID for the record you want to cite or share. For example, if you want to share Steve Potter’s protocol for “Psychrophilic (Cold) protease dissociation of mouse kidney”, you would note the code in the RID field or column: N-H9DA.

To create the new URL, just use the following format:

https://www.atlas-d2k.org/id/<RID>

Which in this case would be:

https://www.atlas-d2k.org/id/N-H9DA

Note: The URL must use https:// and not http:// or the link will not work.